Qlucore Omics Explorer Training Course 2025

Qlucore Omics Explorer is an interactive, fast and easy to use tool that allows biologists and research scientists to visualize, analyse and perform biological exploration on a wide number of different data types including gene expression data (RNA-seq, count matrix etc), proteomics data, methylation data, qPCR data, assay data (like Olink) and other types of multi-variate data. 

Topics that are going to be addressed 
The Qlucore Basic training course will give an introduction on how you can explore and analyse experiment data in a number of hands-on exercises: 

• Import and explore a gene expression dataset, visualize in 3D PCA plot and heatmap 
• Do statistical analysis to find discriminating variables  
• Eliminate influence of covariates (like batch effects)  
• Filtering on already calculated p/q and fold change values from bioinformaticians 
• Import and analyze qPCR data, visualize results in bar and violin plots 
• Explore a dataset using UMAP and t-SNE to find interesting groups 
• Pathway analysis using GSEA (Gene Set Enrichment analysis) 
• Biomarker Workbench 
• Keep track of analysis – log and retrieve your analysis  

What NOT to expect 

• No R - coding will be taught.    

Agenda: 

14:00 Introduction
14:15 Hands on exercises 1-6
15:30 Break
15:45 Hands on exercises 7-9
16:30 Demo Exercises GSEA and Biomarker workbench
          Precision & Companion Diagnostic Software 
          AI-based machine learning classifiers using full transcriptome 
17:00 End 

Instructor: Anders Johansson (Qlucore)

Date: October 23rd, 2025 (14:00-17:00h)

Location: Bioinformatics room (CRG Training Centre) 

Maximum number of participants: 18

Registration deadline: October 17th 2025

Registration HERE

For any information, please send an email to CRG Training and Academic office (TAO): training@crg.eu