Temporary disruption to some CRG online services. Several CRG websites and online services are temporarily unavailable, including our Technology Transfer and Recruitment websites and the registration forms for events and courses. We are working to restore them as soon as possible and apologise for any inconvenience.
Basic Linux & CRG Cluster Course
05/11/2018 to 06/11/2018
Basic Linux & CRG Cluster Course
BASIC LINUX COURSE
Date: 05/11/2018
Hour: 10am-1pm
Location: Training Center (PRBB Patio) - Bioinformatics room
Trainer: Rodny Hernandez (SIT)
Description: This course is suitable for beginners and explains the basics of GNU/Linux commands and scripts creation. In particular it encompasses the following key concepts:
- Introduction (Linux OS and distributions)
- User accounts
- Secure shell (access to remote servers)
- Man pagesWorking with files and directories (Linux file tree)
- Basic Linux commands: (ls, cp, mkdir, rm, mv, find, man, grep, cut, sort...)
- Files permissions (groups, files, chown, chmod)
- Pipes and redirections
- Editor (gedit) Script creation (conditional structures, loops)
CRG CLUSTER USAGE COURSE
Date: 06/11/2018
Hour: 10am-1pm
Location: Training Center (PRBB Patio) - Bioinformatics room
Trainer: Luis Exposito (SIT)
Description: The course it's an introduction to the CRG's computing cluster usage and encompass the following key concepts:
- Univa Grid Engine Introduction
- Cluster concepts (jobs, queues, nodes, slots, memory)
- Cluster information (qstat, qhost)
- Submitting jobs to the cluster (qsub CLI)
- Managing submitted jobs (qstat, qhold, qdel)
- Submit script requesting basic parameters (memory, number of slots)
- Intermediate data and output management (-e, -o and scratch usage for improving jobs performance)
- Job arrays
Registration deadline by 30th October 2018 - HERE